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CAZyme Information: MGYG000003943_00023

You are here: Home > Sequence: MGYG000003943_00023

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species NSJ-50 sp014385105
Lineage Bacteria; Firmicutes_A; Clostridia; UMGS1810; UMGS1810; NSJ-50; NSJ-50 sp014385105
CAZyme ID MGYG000003943_00023
CAZy Family PL21
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1237 MGYG000003943_1|CGC1 140275.76 4.7646
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003943 2095283 MAG United Kingdom Europe
Gene Location Start: 22388;  End: 26101  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003943_00023.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL21 581 662 1.8e-16 0.9722222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 5.31e-06 1118 1233 4 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam18675 HepII_C 3.37e-05 888 971 5 88
Heparinase II C-terminal domain. Heparinase II (HepII) is an 85-kDa dimeric enzyme that depolymerizes both heparin and heparan sulfate glycosaminoglycans. The protein is composed of three domains: an N-terminal alpha-helical domain, a central two-layered beta-sheet domain, and a C-terminal domain forming a two-layered beta-sheet. The C-terminal domain contains nine beta-strands packed together in a manner resembling a beta-barrel.
pfam07940 Hepar_II_III 1.79e-04 596 796 38 185
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBH20141.1 2.23e-131 207 1221 231 1207
QOU74174.1 6.13e-126 62 965 58 933
AYM77060.1 3.15e-124 62 965 58 933
QDG70382.1 1.24e-123 59 985 75 974
QHW00380.1 4.13e-108 210 971 66 800

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2FUQ_A 3.34e-104 210 971 18 747
ChainA, heparinase II protein [Pedobacter heparinus],2FUQ_B Chain B, heparinase II protein [Pedobacter heparinus]
3E80_A 3.51e-104 210 971 20 749
Structureof Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_B Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_C Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus]
3E7J_A 1.62e-101 210 971 20 749
ChainA, Heparinase II protein [Pedobacter heparinus],3E7J_B Chain B, Heparinase II protein [Pedobacter heparinus]
2FUT_A 2.74e-99 210 971 19 748
ChainA, heparinase II protein [Pedobacter heparinus],2FUT_B Chain B, heparinase II protein [Pedobacter heparinus]
5ZU6_A 5.90e-08 1168 1233 88 154
ACBM32 derived from alginate lyase B (AlyB-OU02) [Vibrio]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C6XZB6 3.35e-103 210 971 43 772
Heparin and heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000366 0.998892 0.000204 0.000186 0.000179 0.000159

TMHMM  Annotations      download full data without filtering help

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