CAZyme Information: MGYG000003948_01171

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes
• CAZyme ID: MGYG000003948_01171
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
614	MGYG000003948_30|CGC1	68656.81	6.928

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003948	2150232	MAG	United Kingdom	Europe

• Gene Location: Start: 3740; End: 5584 Strand: -

Full Sequence      

MIGNNRKTIIAMNRFILAMLFFAAIAAAPASGQSLDYDNIAPHPRLLLRSGDAEAMRALP
SKSANARAVHDKIMGEADKMLAAEPVQRVMTGRRLLSVSREALRRIFYLSYAYLATDDVR
YAARAEREMLAVCEFEDWNPSHFLDVGEMTMAVAIGYDWLHDRLSRRSRSIIGTAIYEKG
LRASENDKQAWFFRAENNWNQVCNAGMIYGALATLERSPEYCEALIAKCLASNPTAQKCY
DPDGGYPEGYGYWDYGTGFEVMLAAALQSALGTDAGISAQKSFMRTAEFMTYMTAPSGRC
YNFYDSGSHAGCIPAKYWFARQTGDASTVAVDERFIEAGKIPGDRLLPVYMIFASGLDLS
KSHLPKQRTWVCGGTAPLFIYRSGWTSPDDTYFAIKGGHASSNHAHMDAGSFVYEYDGVR
WAVDLGQHDYNRLEQAGVDLWNMKQESPRWEIFRIGPDSHNTLMFNGNRHNVKGHAQIIR
HFDAPRRKGAVVDLTPVFEGDAKRVVRTAELDKNDWLTLTDHIENGGRESTVEWKMATEA
EAVIVDPATIRLTQNGKSIDVKLRSRAAGEAAIWPEHDYKPFEIKDKNIRRVGFVIRLKA
DEEIDVAVTLAPAK

Enzyme Prediction     

No EC number prediction in MGYG000003948_01171.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	389	565	6.4e-61	0.9720670391061452

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07940	Hepar_II_III	3.19e-08	383	573	12	198	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ54739.1	1.79e-203	12	614	1	604
ALJ47853.1	1.79e-203	12	614	1	604
QRM99495.1	1.79e-203	12	614	1	604
SCV07258.1	1.79e-203	12	614	1	604
CBK67360.1	2.54e-203	12	614	1	604

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	2.15e-07	24	314	119	424	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.15e-07	24	314	119	424	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000359	0.998942	0.000214	0.000163	0.000157	0.000141

TMHMM  Annotations     

start	end
13	35