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CAZyme Information: MGYG000003949_00560
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Eubacterium_F sp900539115 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_F; Eubacterium_F sp900539115 | |||||||||||
| CAZyme ID | MGYG000003949_00560 | |||||||||||
| CAZy Family | GH0 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 102578; End: 103876 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam01471 | PG_binding_1 | 1.72e-14 | 355 | 416 | 1 | 57 | Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. |
| COG3409 | PGRP | 5.39e-11 | 334 | 416 | 23 | 102 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]. |
| COG3409 | PGRP | 4.59e-10 | 345 | 416 | 116 | 183 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]. |
| pfam13620 | CarboxypepD_reg | 3.87e-06 | 30 | 123 | 6 | 81 | Carboxypeptidase regulatory-like domain. |
| COG2989 | YcbB | 0.002 | 346 | 412 | 228 | 292 | Murein L,D-transpeptidase YcbB/YkuD [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWY98201.1 | 4.41e-193 | 11 | 428 | 4 | 419 |
| ASM69598.1 | 6.25e-193 | 23 | 428 | 16 | 419 |
| QEI32542.1 | 8.14e-191 | 23 | 428 | 23 | 428 |
| QHB25032.1 | 8.14e-191 | 23 | 428 | 23 | 428 |
| QRV22093.1 | 1.41e-190 | 24 | 428 | 11 | 414 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1LBU_A | 3.83e-06 | 350 | 419 | 10 | 76 | HydrolaseMetallo (zn) Dd-peptidase [Streptomyces albus G] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999449 | 0.000546 | 0.000016 | 0.000003 | 0.000001 | 0.000008 |