logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003949_02397

You are here: Home > Sequence: MGYG000003949_02397

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_F sp900539115
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_F; Eubacterium_F sp900539115
CAZyme ID MGYG000003949_02397
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
507 MGYG000003949_46|CGC1 57138.73 9.887
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003949 2807569 MAG United Kingdom Europe
Gene Location Start: 7528;  End: 9051  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8 3.1.1.73

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 131 501 3.2e-71 0.9603960396039604

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 4.27e-60 127 497 5 306
Glycosyl hydrolase family 10.
smart00633 Glyco_10 5.54e-59 202 499 4 263
Glycosyl hydrolase family 10.
COG3693 XynA 7.12e-41 151 486 47 325
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFU34339.1 7.53e-110 122 507 173 524
ABX41884.1 1.67e-109 118 507 165 519
BCJ93966.1 1.64e-103 118 507 162 517
CDM69886.1 1.12e-101 141 505 216 560
QFJ54853.1 2.04e-94 122 492 37 373

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7NL2_A 9.28e-35 147 506 29 344
ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069]
6D5C_A 5.69e-33 119 485 19 334
Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]
6FHE_A 1.64e-32 162 500 46 339
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
5OFJ_A 1.64e-32 119 479 7 311
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
2W5F_A 4.36e-32 122 496 182 521
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P23551 2.82e-84 122 502 37 382
Endo-1,4-beta-xylanase A OS=Butyrivibrio fibrisolvens OX=831 GN=xynA PE=3 SV=1
P26223 3.34e-38 161 505 34 340
Endo-1,4-beta-xylanase B OS=Butyrivibrio fibrisolvens OX=831 GN=xynB PE=3 SV=1
Q60042 2.35e-35 128 486 360 673
Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1
P29126 4.18e-34 141 504 641 954
Bifunctional endo-1,4-beta-xylanase XylA OS=Ruminococcus flavefaciens OX=1265 GN=xynA PE=3 SV=1
Q60037 8.09e-34 103 486 352 677
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000267 0.998966 0.000318 0.000166 0.000137 0.000126

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003949_02397.