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CAZyme Information: MGYG000003952_01190

You are here: Home > Sequence: MGYG000003952_01190

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900021155
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900021155
CAZyme ID MGYG000003952_01190
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
875 MGYG000003952_5|CGC1 98378 5.2763
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003952 2320359 MAG United Kingdom Europe
Gene Location Start: 58688;  End: 61315  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003952_01190.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 528 797 4.2e-57 0.8316831683168316
GH28 141 476 1.9e-48 0.9015384615384615

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.71e-61 30 478 4 482
Polygalacturonase [Carbohydrate transport and metabolism].
pfam02156 Glyco_hydro_26 1.52e-36 528 758 2 230
Glycosyl hydrolase family 26.
COG4124 ManB2 1.21e-17 624 858 120 346
Beta-mannanase [Carbohydrate transport and metabolism].
PLN02188 PLN02188 5.74e-13 111 489 36 391
polygalacturonase/glycoside hydrolase family protein
pfam00295 Glyco_hydro_28 2.75e-12 213 473 52 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARK08556.1 7.10e-95 524 862 23 364
AFN73753.1 2.92e-94 525 859 36 366
AFD07539.1 9.58e-94 526 873 50 401
AHM61644.1 2.11e-93 528 859 30 365
QCR22725.1 3.72e-93 528 865 28 369

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q78_A 3.36e-74 513 862 46 406
Thestructure of GH26C from Muricauda sp. MAR_2010_75 [Muricauda sp. MAR_2010_75],6Q78_B The structure of GH26C from Muricauda sp. MAR_2010_75 [Muricauda sp. MAR_2010_75]
4ZXO_A 2.44e-69 530 859 7 334
Thestructure of a GH26 beta-mannanase from Bacteroides ovatus, BoMan26A. [Bacteroides ovatus]
2VX4_A 3.46e-62 503 859 7 386
CellvibrioJaponicus Mannanase Cjman26c Native Form [Cellvibrio japonicus],2VX6_A CELLVIBRIO JAPONICUS MANNANASE CJMAN26C Gal1Man4-BOUND FORM [Cellvibrio japonicus]
2VX5_A 3.46e-62 503 859 7 386
CellvibrioJaponicus Mannanase Cjman26c Mannose-Bound Form [Cellvibrio japonicus]
4CD4_A 6.34e-62 503 859 30 409
Thestructure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManIFG [Cellvibrio japonicus Ueda107],4CD5_A The structure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManMIm [Cellvibrio japonicus Ueda107]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P49424 1.25e-46 525 835 48 366
Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2
A1A278 2.30e-42 526 862 42 396
Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1
P15922 4.67e-32 16 517 26 602
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
O05512 8.58e-16 574 759 79 269
Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=gmuG PE=1 SV=2
P55278 3.71e-14 616 759 121 267
Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis OX=1423 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002267 0.856755 0.140106 0.000361 0.000241 0.000231

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003952_01190.