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CAZyme Information: MGYG000003954_00634

You are here: Home > Sequence: MGYG000003954_00634

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-303 sp900539455
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-303; CAG-303 sp900539455
CAZyme ID MGYG000003954_00634
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
421 MGYG000003954_2|CGC1 47151.05 4.2357
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003954 2269831 MAG United Kingdom Europe
Gene Location Start: 146265;  End: 147530  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003954_00634.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 8.13e-16 346 407 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 2.58e-10 299 409 52 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 3.42e-09 341 407 39 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASN94441.1 4.33e-208 16 420 10 415
QRP40879.1 4.33e-208 16 420 10 415
QJU21247.1 1.24e-207 16 420 10 415
QIX92999.1 7.13e-207 16 420 10 415
ANU48790.1 2.04e-206 16 420 10 415

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7RUM_A 1.12e-06 318 409 13 87
ChainA, Endolysin [Salmonella phage GEC_vB_GOT],7RUM_B Chain B, Endolysin [Salmonella phage GEC_vB_GOT]
5NM7_A 7.64e-06 341 408 5 66
Crystalstructure of Burkholderia AP3 phage endolysin [Burkholderia],5NM7_G Crystal structure of Burkholderia AP3 phage endolysin [Burkholderia]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003954_00634.