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CAZyme Information: MGYG000003957_00563

You are here: Home > Sequence: MGYG000003957_00563

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp014287585
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp014287585
CAZyme ID MGYG000003957_00563
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
473 MGYG000003957_6|CGC2 53858.89 5.4355
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003957 4724401 MAG United Kingdom Europe
Gene Location Start: 77414;  End: 78835  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003957_00563.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 30 468 3e-140 0.993421052631579

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 4.29e-23 29 341 5 353
O-Glycosyl hydrolase family 30.
COG5520 XynC 2.25e-09 1 473 5 431
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBE17217.1 2.94e-235 19 472 23 478
AEW47939.1 6.51e-200 19 473 25 486
AEW47948.1 6.51e-200 19 473 25 486
ADF52950.1 6.14e-187 2 469 4 468
AGP34188.1 1.41e-109 22 472 4 447

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6KRL_A 3.34e-06 19 473 86 545
Crystalstructure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
6IUJ_A 4.08e-06 7 473 4 474
ChainA, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q76FP5 4.19e-57 13 470 10 473
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
A0A401ETL2 6.30e-21 20 430 29 571
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000298 0.998955 0.000192 0.000195 0.000181 0.000156

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003957_00563.