CAZyme Information: MGYG000003957_02727

Basic Information

• Species: Parabacteroides sp014287585
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp014287585
• CAZyme ID: MGYG000003957_02727
• CAZy Family: GH2
• CAZyme Description: Beta-galactosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
929		104580.02	6.1406

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003957	4724401	MAG	United Kingdom	Europe

• Gene Location: Start: 7808; End: 10597 Strand: -

Full Sequence      

MRRINIYLLLTGLLICLFACKNNPARISLGGEWEFALDSTDTGINENWAGQNFKNTIQLP
GTTDDAGYGTPNKLKPAIQKPQVLHLTRKNSYVGPAWYSKEVDIPSGWKGKAIELKLERV
IWQTSVWVDGKQVEGMQESLVAPHLYDLTKQLTPGRHKITIRVDNRKRYDITAGDMAHAY
TNETQIMWNGIIGEIALTAKDAVSIRDLQAYPDYKNKQVKVKCLVNNTGAATSGSLKADI
RTATNPVIQMQQHVTLQPGENRVELICPIKGEVKVWNEFTPTLYTLRASIQTDPYKDSQE
IKFGFRDLRKSGPALLLNDQKIFLRGTLECCIFPLTGYPPMEHEGWAKVFATAREWGLNH
LRFHSWCPPKAAFEVADSLGFYLQVELPLWSTNLKEDERAPYLYAEADRILEEYGNHLSF
CLLSLGNELQYDFEFLGSLLNHVKEKDPRHLYTTTSFTFEKGHGDWPEANDDFFITQWTR
KGWVRGQGVFNTEPPRFDKNYSASVEGMEVPLITHEIGQYAVYPDLKEIEKYTGVLDPLN
FKGVKEDLEKKGLADKADDYLMATGKLAALLYKEEIERAMKTPGISGFQLLDLHDFPGQG
TALVGLLNAFWESKGVTEAATFRQSCAPVTPLARFSKAVYTSDEPFEAGIEVVNYSDKAI
ENAVIDWKLTDRNGKSVAQGEFPARSLPVGENSSAGTIRCPLNTIAEAKELNLSATLKGT
VYTNEWKIWVYPASLSVDKGEIVVTDRLAVAEKALQDGKSVLFNPPYESLKGLEGKFVPV
FWSPVHFPKQAGTMGLLLDPAHPAFARFPTDGHTDWQWWRLTTQSKTLCIDSLYTEVTPL
VECVDNFANNRRLTNLFETNCLNGKLILCSMDLLHEQEKNPEKKQLLYSLVEYMKSEAFN
PASHTSPDVITRFLTAGQSSSREKPESIY

Enzyme Prediction     

No EC number prediction in MGYG000003957_02727.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH2	23	813	7.7e-69	0.8164893617021277

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3250	LacZ	1.08e-22	26	473	12	462	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02837	Glyco_hydro_2_N	1.64e-15	28	165	3	135	Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10150	PRK10150	2.97e-15	26	326	12	296	beta-D-glucuronidase; Provisional
pfam00703	Glyco_hydro_2	8.47e-09	203	306	1	106	Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK09525	lacZ	1.76e-08	22	327	48	355	beta-galactosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QOG04937.1	0.0	9	929	4	929
APA00996.1	0.0	27	929	27	931
ASM65962.1	0.0	27	929	27	934
QRP59794.1	0.0	27	929	22	929
QQT79911.1	0.0	27	929	22	929

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6D1N_A	1.47e-19	28	447	38	443	Apostructure of Bacteroides uniformis Beta-glucuronidase 1 [Bacteroides uniformis],6D1N_B Apo structure of Bacteroides uniformis Beta-glucuronidase 1 [Bacteroides uniformis],6D41_A Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone [Bacteroides uniformis],6D41_B Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone [Bacteroides uniformis],6D6W_A Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate [Bacteroides uniformis],6D6W_B Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate [Bacteroides uniformis],6D6W_C Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate [Bacteroides uniformis],6D6W_D Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate [Bacteroides uniformis],6D7F_A Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_B Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_C Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_D Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_E Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_F Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis]
6D89_A	4.38e-19	79	447	90	435	Bacteroidesuniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_B Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_C Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_D Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis]
7VQM_A	1.56e-16	23	624	10	574	ChainA, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_B Chain B, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_C Chain C, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_D Chain D, GH2 beta-galacturonate AqGalA [Aquimarina sp.]
6LEM_B	1.57e-13	29	537	13	529	ChainB, Beta-D-glucuronidase [Escherichia coli]
6LEJ_B	1.57e-13	29	537	15	531	ChainB, Beta-D-glucuronidase [Escherichia coli]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P05804	8.62e-13	29	537	15	531	Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
T2KM09	2.57e-09	94	454	106	456	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000070	0.999977	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003957_02727.