logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003957_03348

You are here: Home > Sequence: MGYG000003957_03348

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp014287585
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp014287585
CAZyme ID MGYG000003957_03348
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
280 32110.87 4.8044
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003957 4724401 MAG United Kingdom Europe
Gene Location Start: 129;  End: 971  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 1 264 4.4e-114 0.458029197080292

CDD Domains      help

MGYG000003957_03348 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT50242.1 2.19e-200 1 280 323 602
EDN88509.1 2.38e-197 1 280 323 602
QUT51920.1 4.15e-153 1 279 328 606
QUR48119.1 5.88e-153 1 279 328 606
QCY57951.1 5.88e-153 1 279 328 606

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 1.22e-43 2 270 344 601
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 6.17e-43 2 270 344 601
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A6LFT2 9.50e-153 1 279 328 606
Alpha-1,3-galactosidase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=glaB PE=3 SV=1
Q64XV2 5.32e-143 1 263 329 595
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaB PE=3 SV=1
Q5LGZ8 5.32e-143 1 263 329 595
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1
A6KWM0 1.65e-138 1 263 326 592
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
A6L2M8 1.16e-133 1 269 325 598
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000072 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003957_03348.