Species | HGM12713 sp900754175 | |||||||||||
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Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; HGM12713; HGM12713 sp900754175 | |||||||||||
CAZyme ID | MGYG000003959_00363 | |||||||||||
CAZy Family | GH4 | |||||||||||
CAZyme Description | Alpha-galacturonidase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 31035; End: 32444 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH4 | 12 | 193 | 5e-59 | 0.994413407821229 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd05297 | GH4_alpha_glucosidase_galactosidase | 5.73e-144 | 11 | 451 | 1 | 423 | Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture |
COG1486 | CelF | 3.96e-98 | 11 | 451 | 4 | 429 | Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase [Carbohydrate transport and metabolism]. |
pfam02056 | Glyco_hydro_4 | 4.82e-61 | 12 | 193 | 1 | 181 | Family 4 glycosyl hydrolase. |
PRK15076 | PRK15076 | 4.67e-57 | 10 | 451 | 1 | 420 | alpha-galactosidase; Provisional |
cd05296 | GH4_P_beta_glucosidase | 9.83e-48 | 12 | 451 | 2 | 412 | Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AFK85236.1 | 1.53e-211 | 1 | 467 | 1 | 462 |
ADL69889.1 | 3.36e-208 | 1 | 467 | 1 | 462 |
ADZ85649.1 | 7.29e-207 | 1 | 454 | 1 | 454 |
QEH67112.1 | 3.42e-205 | 1 | 454 | 1 | 454 |
SNX53414.1 | 7.96e-204 | 1 | 466 | 1 | 461 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3FEF_A | 1.93e-153 | 9 | 451 | 4 | 436 | Crystalstructure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_B Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_C Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_D Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis] |
5C3M_A | 8.49e-24 | 39 | 451 | 34 | 427 | Crystalstructure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_B Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_C Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_D Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus] |
1S6Y_A | 2.34e-22 | 9 | 436 | 6 | 416 | 2.3Acrystal structure of phospho-beta-glucosidase [Geobacillus stearothermophilus] |
1U8X_X | 2.28e-20 | 81 | 398 | 98 | 402 | CrystalStructure Of Glva From Bacillus Subtilis, A Metal-requiring, Nad-dependent 6-phospho-alpha-glucosidase [Bacillus subtilis] |
6DUX_A | 3.76e-18 | 82 | 241 | 77 | 229 | ChainA, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DUX_B Chain B, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DVV_A Chain A, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DVV_B Chain B, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
I3VRU1 | 3.06e-212 | 1 | 467 | 1 | 462 | Alpha-galacturonidase OS=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) OX=1094508 GN=Tsac_0200 PE=1 SV=1 |
D3T426 | 2.17e-180 | 1 | 461 | 1 | 453 | Alpha-galacturonidase OS=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) OX=580331 GN=Thit_1733 PE=1 SV=1 |
A9KTB9 | 4.28e-171 | 1 | 463 | 1 | 466 | Alpha-galacturonidase OS=Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) OX=357809 GN=Cphy_3396 PE=1 SV=1 |
P39130 | 9.29e-158 | 9 | 451 | 8 | 440 | Alpha-galacturonidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lplD PE=1 SV=2 |
P30877 | 3.58e-43 | 12 | 434 | 6 | 419 | Alpha-galactosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=melA PE=3 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000082 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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