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CAZyme Information: MGYG000003962_00044
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Archaea; Thermoplasmatota; Thermoplasmata; Methanomassiliicoccales; Methanomethylophilaceae; UBA71; | |||||||||||
| CAZyme ID | MGYG000003962_00044 | |||||||||||
| CAZy Family | GT66 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 35978; End: 41662 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT66 | 74 | 518 | 1.9e-37 | 0.5829725829725829 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG1287 | Stt3 | 2.03e-27 | 36 | 564 | 18 | 564 | Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]. |
| pfam02516 | STT3 | 3.08e-11 | 96 | 282 | 63 | 239 | Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. |
| COG1807 | ArnT | 1.09e-10 | 105 | 298 | 65 | 234 | 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. |
| pfam13231 | PMT_2 | 1.41e-07 | 140 | 292 | 30 | 160 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
| cd10316 | RGL4_M | 0.001 | 931 | 1003 | 4 | 87 | Middle domain of rhamnogalacturonan lyase, a family 4 polysaccharide lyase. The rhamnogalacturonan lyase of the polysaccharide lyase family 4 (RGL4) is involved in the degradation of RG (rhamnogalacturonan) type-I, an important pectic plant cell wall polysaccharide, by cleaving the alpha-1,4 glycoside bond between L-rhamnose and D-galacturonic acids in the backbone of RG type-I through a beta-elimination reaction. RGL4 consists of three domains, an N-terminal catalytic domain, a middle domain with a FNIII type fold and a C-terminal domain with a jelly roll fold. Both the middle domain represented by this model and the C-terminal domain are putative carbohydrate binding modules. There are two types of RG lyases, which both cleave the alpha-1,4 bonds of the RG-I main chain (RG chain) through the beta-elimination reaction, but belong to two structurally unrelated polysaccharide lyase (PL) families, 4 and 11. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QHK18259.1 | 0.0 | 89 | 1894 | 1 | 1799 |
| AMK14457.1 | 0.0 | 6 | 1894 | 1 | 1808 |
| AIZ57239.1 | 1.11e-296 | 9 | 1894 | 1 | 1911 |
| AYQ55719.1 | 3.80e-294 | 6 | 1894 | 1 | 1943 |
| AMH93783.1 | 6.44e-212 | 11 | 1894 | 6 | 1867 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3WAJ_A | 6.26e-10 | 25 | 452 | 2 | 452 | Crystalstructure of the Archaeoglobus fulgidus oligosaccharyltransferase (O29867_ARCFU) complex with Zn and sulfate [Archaeoglobus fulgidus DSM 4304],3WAK_A Crystal structure of the Archaeoglobus fulgidus oligosaccharyltransferase (O29867_ARCFU) in the apo form [Archaeoglobus fulgidus DSM 4304] |
| 5GMY_A | 6.26e-10 | 25 | 452 | 2 | 452 | ChainA, Transmembrane oligosaccharyl transferase, putative [Archaeoglobus fulgidus DSM 4304],7E9S_A Chain A, Dolichyl-phosphooligosaccharide-protein glycotransferase 3 [Archaeoglobus fulgidus DSM 4304] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O29867 | 3.41e-09 | 25 | 452 | 2 | 452 | Dolichyl-phosphooligosaccharide-protein glycotransferase 3 OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=aglB3 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999950 | 0.000057 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 36 | 58 |
| 131 | 153 |
| 160 | 182 |
| 187 | 205 |
| 217 | 234 |
| 238 | 255 |
| 267 | 289 |
| 294 | 316 |
| 321 | 343 |
| 377 | 399 |
| 406 | 423 |
| 428 | 447 |
| 474 | 496 |
| 1864 | 1886 |