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CAZyme Information: MGYG000003967_00048

You are here: Home > Sequence: MGYG000003967_00048

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1338 sp900550805
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; QALW01; UMGS1338; UMGS1338 sp900550805
CAZyme ID MGYG000003967_00048
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
636 72884.91 5.5648
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003967 2064493 MAG United Kingdom Europe
Gene Location Start: 51878;  End: 53788  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003967_00048.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 196 632 7.9e-57 0.8650793650793651
CBM67 7 163 9.6e-23 0.8920454545454546

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 3.02e-16 302 634 5 340
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam06202 GDE_C 4.08e-04 355 429 46 121
Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme AGL. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homolog GDB1 that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUS95627.1 8.87e-129 6 633 10 707
QNK57365.1 1.18e-100 1 634 1 713
QGQ97405.1 2.43e-100 1 634 3 714
ARN56684.1 1.17e-99 7 634 23 712
AQQ71631.1 1.32e-81 3 634 6 693

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 5.17e-25 204 629 440 871
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
3CIH_A 1.19e-09 190 628 181 630
Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003967_00048.