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CAZyme Information: MGYG000003984_00286

You are here: Home > Sequence: MGYG000003984_00286

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp900752395
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900752395
CAZyme ID MGYG000003984_00286
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
643 68998.12 3.8898
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003984 2095190 MAG United Kingdom Europe
Gene Location Start: 82430;  End: 84361  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003984_00286.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 282 395 3.5e-16 0.9453125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.52e-19 228 405 57 237
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
PTZ00449 PTZ00449 7.93e-13 402 585 558 786
104 kDa microneme/rhoptry antigen; Provisional
NF033913 fibronec_FbpA 2.91e-12 398 568 155 318
LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
NF033839 PspC_subgroup_2 1.01e-10 411 639 304 556
pneumococcal surface protein PspC, LPXTG-anchored form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
pfam01832 Glucosaminidase 1.81e-10 281 345 1 75
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEK17141.1 1.10e-107 1 405 1 397
QOV20091.1 1.97e-96 40 405 30 387
AWY97555.1 5.54e-91 38 405 34 390
QNM11023.1 3.82e-82 92 405 139 447
BCT44532.1 3.12e-79 85 405 140 451

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 3.54e-30 128 405 55 290
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 1.96e-28 128 405 423 658
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 2.29e-28 128 405 467 702
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000988 0.413044 0.584762 0.000491 0.000410 0.000292

TMHMM  Annotations      download full data without filtering help

start end
616 635