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CAZyme Information: MGYG000003984_00947

You are here: Home > Sequence: MGYG000003984_00947

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp900752395
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900752395
CAZyme ID MGYG000003984_00947
CAZy Family GH36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1754 193913.16 4.3642
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003984 2095190 MAG United Kingdom Europe
Gene Location Start: 7140;  End: 12404  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003984_00947.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5492 YjdB 3.00e-14 1408 1566 193 327
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 1.15e-13 1430 1662 132 327
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 4.53e-13 1397 1474 1 76
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam02368 Big_2 4.53e-13 1493 1570 1 76
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam00754 F5_F8_type_C 4.60e-10 142 264 6 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBK22244.1 0.0 1 1376 1 1379
BBK62317.1 0.0 1 1376 1 1379
SQG39183.1 1.62e-212 14 1273 17 1287
AMN35790.1 8.49e-212 14 1273 17 1287
AQW23840.1 8.49e-212 14 1273 17 1287

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33747 1.11e-07 1397 1561 38 190
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000501 0.998131 0.000560 0.000379 0.000220 0.000163

TMHMM  Annotations      download full data without filtering help

start end
1729 1748