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CAZyme Information: MGYG000003992_02228
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | 43-108 sp001915545 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; 43-108; 43-108 sp001915545 | |||||||||||
| CAZyme ID | MGYG000003992_02228 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 4709; End: 6166 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 208 | 466 | 1.4e-40 | 0.7476923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00295 | Glyco_hydro_28 | 2.84e-10 | 210 | 461 | 88 | 274 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| COG5434 | Pgu1 | 5.39e-10 | 207 | 464 | 218 | 455 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03010 | PLN03010 | 2.51e-06 | 190 | 398 | 115 | 311 | polygalacturonase |
| PLN03003 | PLN03003 | 1.14e-04 | 217 | 398 | 148 | 292 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 0.002 | 228 | 431 | 171 | 361 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT92200.1 | 7.36e-159 | 3 | 485 | 5 | 461 |
| ALJ62050.1 | 1.20e-157 | 3 | 485 | 5 | 461 |
| QUU00181.1 | 8.66e-156 | 18 | 485 | 20 | 464 |
| QQR19335.1 | 1.72e-154 | 3 | 485 | 17 | 470 |
| ANU59785.1 | 1.72e-154 | 3 | 485 | 17 | 470 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1HG8_A | 3.28e-06 | 229 | 397 | 126 | 267 | Endopolygalacturonasefrom the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1DBR6 | 2.63e-07 | 205 | 431 | 231 | 422 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
| Q7M1E7 | 8.59e-07 | 205 | 342 | 155 | 288 | Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1 |
| Q9LW07 | 1.83e-06 | 210 | 398 | 141 | 292 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| P49062 | 2.27e-06 | 229 | 406 | 168 | 332 | Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1 |
| Q5AYH4 | 3.47e-06 | 229 | 433 | 294 | 471 | Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.002878 | 0.992973 | 0.003386 | 0.000263 | 0.000232 | 0.000227 |