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CAZyme Information: MGYG000003994_01455

You are here: Home > Sequence: MGYG000003994_01455

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471;
CAZyme ID MGYG000003994_01455
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
706 80786.62 8.6655
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003994 2451435 MAG United Kingdom Europe
Gene Location Start: 4371;  End: 6491  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003994_01455.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 60 351 3e-118 0.9965277777777778
CE8 404 661 4.2e-29 0.8541666666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 2.13e-156 60 352 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 1.88e-114 60 351 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PLN02432 PLN02432 4.82e-11 406 691 26 291
putative pectinesterase
COG4677 PemB 3.99e-07 390 525 75 230
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 3.67e-05 397 454 1 65
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ61703.1 0.0 1 706 1 707
QUT92735.1 0.0 1 705 1 706
QEW34712.1 0.0 32 706 40 713
QJR66036.1 0.0 37 706 44 713
QJR70737.1 0.0 37 706 44 713

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 6.10e-54 43 361 77 407
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 7.98e-52 54 346 38 317
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 1.06e-50 54 346 38 317
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000391 0.998964 0.000196 0.000159 0.000127 0.000127

TMHMM  Annotations      download full data without filtering help

start end
9 31