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CAZyme Information: MGYG000003994_02019

You are here: Home > Sequence: MGYG000003994_02019

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471;
CAZyme ID MGYG000003994_02019
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
558 61063.98 4.3974
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003994 2451435 MAG United Kingdom Europe
Gene Location Start: 917;  End: 2593  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003994_02019.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 79 269 1.1e-78 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.71e-11 1 262 1 275
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 2.34e-05 81 262 3 188
Amb_all domain.
TIGR04183 Por_Secre_tail 0.003 500 548 12 61
Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.
pfam00544 Pec_lyase_C 0.007 74 240 2 194
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AKP52263.1 3.02e-214 1 465 1 461
QQY83656.1 3.02e-214 3 465 2 461
AUS04449.1 4.95e-213 3 465 2 461
QEG34169.1 3.69e-209 28 465 27 466
CAD74167.1 3.92e-208 28 465 27 454

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FI2_A 9.75e-09 34 238 46 251
VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 8.25e-62 24 465 17 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 6.38e-60 24 465 17 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 2.43e-59 6 465 7 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q4WL88 2.49e-59 17 469 11 418
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q5B297 6.94e-59 14 468 8 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000222 0.999064 0.000204 0.000164 0.000164 0.000147

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003994_02019.