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CAZyme Information: MGYG000003999_00911
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; CAG-521; | |||||||||||
| CAZyme ID | MGYG000003999_00911 | |||||||||||
| CAZy Family | GT107 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 34905; End: 35915 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT107 | 37 | 332 | 1e-105 | 0.543233082706767 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd16440 | beta_Kdo_transferase_KpsC_1 | 2.91e-119 | 46 | 311 | 1 | 262 | beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsC, repeat1. KpsC is a beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase. It is part of the ATP-binding cassette transporter dependent capsular polysaccharides (CPSs) synthesis pathway, one of two CPS synthesis pathways present in Escherichia coli. The poly-Kdo linker is thought to be the common feature of CPSs synthesized via this pathway. CPSs are high-molecular-mass cell-surface polysaccharides that are important virulence factors for many pathogenic bacteria. KpsC contains a domain duplication. |
| cd16439 | beta_Kdo_transferase_KpsC_2 | 1.79e-89 | 45 | 308 | 2 | 259 | beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsC, repeat 2. KpsC is a beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase. It is part of the ATP-binding cassette transporter dependent capsular polysaccharides (CPSs) synthesis pathway, one of two CPS synthesis pathways present in Escherichia coli. The poly-Kdo linker is thought to be the common feature of CPSs synthesized via this pathway. CPSs are high-molecular-mass cell-surface polysaccharides that are important virulence factors for many pathogenic bacteria. KpsC contains a domain duplication. |
| COG3563 | KpsC | 9.39e-84 | 14 | 332 | 3 | 314 | Capsule polysaccharide export protein KpsC/LpsZ [Cell wall/membrane/envelope biogenesis]. |
| cd16437 | beta_Kdo_transferase_KpsC | 5.97e-77 | 46 | 308 | 1 | 256 | beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsC. KpsC is a beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase. It is part of the ATP-binding cassette transporter dependent capsular polysaccharides (CPSs) synthesis pathway, one of two CPS synthesis pathways present in Escherichia coli. The poly-Kdo linker is thought to be the common feature of CPSs synthesized via this pathway. CPSs are high-molecular-mass cell-surface polysaccharides, that are important virulence factors for many pathogenic bacteria. KpsC contains a domain duplication. |
| COG3563 | KpsC | 9.65e-70 | 4 | 332 | 316 | 645 | Capsule polysaccharide export protein KpsC/LpsZ [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQZ23619.1 | 2.58e-112 | 28 | 332 | 61 | 364 |
| AVA38547.1 | 2.58e-112 | 28 | 332 | 61 | 364 |
| QQZ19887.1 | 2.58e-112 | 28 | 332 | 61 | 364 |
| AYY80152.1 | 2.51e-105 | 28 | 330 | 61 | 362 |
| AJI61148.1 | 2.04e-78 | 57 | 335 | 105 | 385 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6MGB_A | 2.49e-55 | 44 | 327 | 44 | 322 | Thermosulfurimonasdismutans KpsC, beta Kdo 2,4 transferase [Thermosulfurimonas dismutans] |
| 6MGC_A | 1.34e-53 | 44 | 336 | 38 | 327 | Escherichiacoli KpsC, N-terminal domain [Escherichia coli APEC O1] |
| 6MGD_A | 2.10e-31 | 49 | 333 | 49 | 325 | Thermosulfurimonasdismutans KpsC, beta Kdo 2,7 transferase [Thermosulfurimonas dismutans],6MGD_B Thermosulfurimonas dismutans KpsC, beta Kdo 2,7 transferase [Thermosulfurimonas dismutans] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P57037 | 9.45e-58 | 43 | 332 | 53 | 347 | Capsule polysaccharide modification protein LipA OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=lipA PE=4 SV=1 |
| Q05013 | 2.53e-57 | 42 | 332 | 52 | 347 | Capsule polysaccharide modification protein LipA OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=lipA PE=4 SV=2 |
| P42217 | 1.15e-50 | 44 | 336 | 37 | 326 | Capsule polysaccharide export protein KpsC OS=Escherichia coli OX=562 GN=kpsC PE=4 SV=1 |
| P31858 | 7.37e-40 | 9 | 323 | 83 | 396 | Lipopolysaccharide-processing protein LpsZ OS=Rhizobium meliloti OX=382 GN=lpsZ PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000044 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |