CAZyme Information: MGYG000004003_00058

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
• CAZyme ID: MGYG000004003_00058
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YteR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
401	MGYG000004003_1|CGC2	45686.9	5.7543

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004003	5653807	MAG	United Kingdom	Europe

• Gene Location: Start: 93899; End: 95104 Strand: +

Full Sequence      

MNRNLLKLIVACGAACFIACTAPQKAETEKWSERMARSEMKRFPEPWMIEKAKKPRWGYT
HGLVVKSMLEEWKHTGDSAYYDYAKIYADSLIDVDGHIKTMKYLSFNIDNVNGGKILFDL
YAQTGDERYKIAMDTLRKQMAEQPRTSEGGFWHKLRYPHQMWLDGIFMASPYLVQYGATF
DEPGLFDEAVKQILLINRKTYDPATGLYYHGWDESCDQKWANPETGCSPNFWSRSIGWYG
AAIVDVLDYLPQETAGRDSVMLILQGLAKTLVKYQDPQSGTWYQVTDQGAREGNYLESSA
TALFIYTLAKAINKGYIGKEYVEPTQKAFNGMVNTFTRLEEDGSYTITNCCAVAGLGGDS
KRYRDGSFEYYISEPIIENDPKSVGSFILAAIEYEKMIEKK

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	49	396	1.8e-120	0.9849397590361446

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07470	Glyco_hydro_88	3.84e-143	31	397	1	342	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225	YesR	2.56e-110	24	396	8	355	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU95830.1	4.86e-302	1	401	1	401
QMW88032.1	1.48e-289	1	400	1	400
QUT38413.1	1.48e-289	1	400	1	400
ALJ42168.1	1.48e-289	1	400	1	400
QQA06610.1	1.48e-289	1	400	1	400

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WU0_A	9.15e-104	57	397	23	361	StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A	1.14e-96	56	397	38	367	Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	4.72e-96	56	397	28	357	ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3QWT_A	3.68e-24	57	364	65	355	ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3PMM_A	2.10e-22	57	364	66	356	ChainA, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34559	6.25e-96	56	397	38	367	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6	3.18e-46	168	393	1	227	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7	3.18e-46	168	393	1	227	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1
O31521	2.60e-19	57	343	29	294	Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000001	1.000049	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004003_00058.