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CAZyme Information: MGYG000004003_00065

You are here: Home > Sequence: MGYG000004003_00065

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004003_00065
CAZy Family GH143
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1106 MGYG000004003_1|CGC2 127076.07 6.271
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004003 5653807 MAG United Kingdom Europe
Gene Location Start: 107502;  End: 110822  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004003_00065.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH143 18 567 1.3e-295 0.9946043165467626
GH142 630 1098 5.5e-232 0.9979123173277662

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13088 BNR_2 1.69e-08 266 340 168 247
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
COG3408 GDB1 1.31e-06 751 990 343 588
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
pfam01204 Trehalase 0.006 821 975 308 454
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU95822.1 0.0 1 1105 1 1105
QUR43134.1 0.0 1 1106 1 1106
QMW88040.1 0.0 1 1106 1 1109
QQA06618.1 0.0 1 1106 1 1109
AAO76127.1 0.0 1 1106 1 1109

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQR_A 0.0 23 1106 25 1108
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQS_A 0.0 23 1106 25 1108
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A 4.87e-18 649 1104 303 814
Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 3.85e-17 649 1104 334 845
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000215 0.999203 0.000146 0.000153 0.000134 0.000126

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004003_00065.