CAZyme Information: MGYG000004003_00805

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
• CAZyme ID: MGYG000004003_00805
• CAZy Family: GH28
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
470	MGYG000004003_9|CGC1	52772.06	6.1934

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004003	5653807	MAG	United Kingdom	Europe

• Gene Location: Start: 39425; End: 40837 Strand: +

Full Sequence      

MNIFRVLSGRRKWLLAVSITFSTMASAQLATYPEGVNAGMPHNDDYTVRVRVPGGEWKDL
FEYNVNVDMDNVQSASMVQFDMGSPVEVMVKKNNGLIQDVQIRPLARGVRHTVNRNTIQF
MLEKPQYLSVEFNGDRLHNLHLFANPLETETYTGSNEKVMYFGPGVHRPQDVPNNQIQIP
SNTTVYLAPGAVVKAKLLVDKAENVRIIGRGILEHPIRGIEVTHSKNVLIDGITVVNPDH
YTVFGGESEGLTIKNLKSFSCKGWSDGIDMMCCNDVLIDNVFMRNSDDCIAIYAHRWSYY
GGSKNVTLQNSVLWADIAHPINIGGHGNAACAEGEILENITIRNIDILEHDEDDSPYQGC
MAIDCGDKNLVRKVLFEDIRVESIQEGRLFHINVRFNPKYDKQPGRGIEDITFRNITYDG
VGENPSLLKGFDKERGIKNVTFENVMINGVKMKSTDDFITNEFVKGIKVK

Enzyme Prediction     

No EC number prediction in MGYG000004003_00805.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	194	453	3.3e-44	0.7569230769230769

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5434	Pgu1	3.47e-14	194	352	218	371	Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295	Glyco_hydro_28	4.78e-08	197	462	88	318	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUR43693.1	1.06e-299	1	470	1	470
QQR19335.1	1.86e-293	1	470	1	470
ANU59785.1	1.86e-293	1	470	1	470
QNL37057.1	7.56e-293	1	470	1	470
QUT28576.1	6.20e-292	1	470	1	470

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.163509	0.604595	0.014188	0.203458	0.012702	0.001531

TMHMM  Annotations     

start	end
13	32