CAZyme Information: MGYG000004003_00813

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
• CAZyme ID: MGYG000004003_00813
• CAZy Family: GH28
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
479		53496.77	6.7644

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004003	5653807	MAG	United Kingdom	Europe

• Gene Location: Start: 53051; End: 54490 Strand: +

Full Sequence      

MKRFWVLLLFCTVVLNCISASIKEPLVTYAAPGGAALNDDFTVRVRQKGREWAVLSTYLV
KVDEVRNTKHHVESASMATFDFSGTVEVAVTYNRGKVNAARIRPLSYNIPSQIENNTVTF
SLDRPGNLSVEVNGDIFHNLHLFANPIEESVPDKNDPDVLYYAPGIHTLENGELRVPSGK
TVYLAGGALLMGRVVIDNVHDVKLIGRGIIDHTVKGGIRIANSRNVYVEGIAATQCSTGG
SDNVTIRNVKCISYYSWGDGMNVFASTNVLFDGVFCRTSDDCTTVYGTRLGFVGGCRNIT
MRNSTLWADVAHPIFIGLHGNTKEPEILENLNYINIDILDHKEKQVDYQGCLAINAGDNN
LVRKVRFENIRIENIRQGQIVNLRIFNNEKYCTAPGRGIEDVLFKNVSYAGENAELSIIE
GHNEERKVKNVRFENLSINGEFIYDEMPDKPKWYKTADMARFYIGPHVEGITFTKTDIK

Enzyme Prediction     

No EC number prediction in MGYG000004003_00813.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	194	441	1.3e-31	0.7384615384615385

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5434	Pgu1	3.29e-04	221	305	244	338	Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295	Glyco_hydro_28	0.008	222	440	102	305	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT42764.1	1.37e-263	1	474	1	473
QUT70389.1	1.37e-263	1	474	1	473
BCA49442.1	1.37e-263	1	474	1	473
ALJ42773.1	5.50e-263	1	474	1	473
QMW87197.1	5.50e-263	1	474	1	473

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.002195	0.980931	0.016127	0.000251	0.000236	0.000246

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004003_00813.