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CAZyme Information: MGYG000004003_01226

You are here: Home > Sequence: MGYG000004003_01226

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004003_01226
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
491 MGYG000004003_16|CGC1 54148.54 7.5145
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004003 5653807 MAG United Kingdom Europe
Gene Location Start: 11460;  End: 12935  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004003_01226.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 89 277 1.4e-78 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 2.28e-09 49 286 48 286
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 2.27e-06 91 269 3 175
Amb_all domain.
pfam18884 TSP3_bac 1.90e-04 440 461 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU94498.1 0.0 1 491 1 491
QRQ55765.1 0.0 11 491 17 498
SCV08373.1 0.0 11 491 17 498
ALJ48955.1 0.0 11 491 17 498
QDM11671.1 0.0 11 491 17 498

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 5.39e-51 16 488 3 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 1.07e-49 16 488 3 418
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B0XMA2 1.55e-48 36 488 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
A1DPF0 4.17e-48 36 488 21 419
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q4WL88 4.17e-48 36 488 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000310 0.999007 0.000230 0.000165 0.000150 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004003_01226.