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CAZyme Information: MGYG000004021_00397

You are here: Home > Sequence: MGYG000004021_00397

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11471 sp900542765
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; UBA11471 sp900542765
CAZyme ID MGYG000004021_00397
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
473 MGYG000004021_2|CGC2 51397.69 4.6115
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004021 2404087 MAG United Kingdom Europe
Gene Location Start: 184511;  End: 185932  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004021_00397.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 164 331 3.1e-42 0.7821782178217822

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 2.69e-32 159 330 18 186
Amb_all domain.
COG3866 PelB 5.15e-31 17 393 21 342
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 1.05e-16 176 330 52 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADE83376.1 1.31e-120 25 394 43 421
QVJ81552.1 1.85e-120 25 394 43 421
AAW84045.1 2.39e-112 65 398 1 328
AHJ96631.1 1.83e-48 121 394 79 364
AYN03314.1 1.68e-47 32 394 58 361

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1VBL_A 1.41e-17 164 348 136 334
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
3ZSC_A 1.79e-17 176 306 83 213
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
3KRG_A 1.03e-12 184 307 150 296
ChainA, Pectate lyase [Bacillus subtilis]
5AMV_A 4.33e-12 184 307 150 296
Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1BN8_A 4.71e-12 184 307 171 317
BacillusSubtilis Pectate Lyase [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9WYR4 2.21e-20 176 306 110 240
Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1
A1CYB8 3.03e-20 164 395 96 320
Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyA PE=3 SV=1
B1L969 7.23e-20 176 306 108 238
Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1
B0XT32 1.39e-19 164 395 96 320
Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1
Q4WIT0 1.39e-19 164 395 96 320
Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000266 0.999028 0.000194 0.000173 0.000157 0.000140

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004021_00397.