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CAZyme Information: MGYG000004021_01183

You are here: Home > Sequence: MGYG000004021_01183

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11471 sp900542765
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; UBA11471 sp900542765
CAZyme ID MGYG000004021_01183
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
699 MGYG000004021_11|CGC1 76005.07 4.5734
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004021 2404087 MAG United Kingdom Europe
Gene Location Start: 36998;  End: 39097  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004021_01183.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 75 261 1.6e-77 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam18884 TSP3_bac 7.49e-05 439 460 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.
COG3866 PelB 1.78e-04 24 381 29 341
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 0.003 69 261 3 186
Amb_all domain.
NF033506 PACE-CTERM-PROT 0.006 462 580 244 385
putative S-layer protein. Assembled genomes from the Candidatus Pacearchaeota archaeon group and its close relatives, so far all uncultured, have a single archaeosortase, called pacearchaseosortase. A search protein archaeosortase targets, with a C-terminal domain resembling other archaeosortase and exosortase sorting signal regions, found this family as the best candidate. It is nearly always encoded by a gene found adjacent to the pacearchaseosortase gene. This dedicated arrangement, a sorting enzyme encoded next to its only predicted sorting substrate, suggests that members of this family, called PACE-CTERM, may be an important and abundant surface protein, most likely the major S-layer protein.
pfam00544 Pec_lyase_C 0.008 113 218 58 175
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75603.1 3.12e-199 6 508 1 511
QUT77823.1 4.24e-196 22 487 50 520
QUT93111.1 2.98e-195 21 482 41 511
ALJ61309.1 3.42e-195 21 482 45 515
QQR08040.1 4.63e-195 3 648 8 653

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.50e-53 23 482 20 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 2.76e-52 23 482 20 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 3.45e-49 4 482 6 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7 1.54e-47 23 482 20 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B0XMA2 2.01e-46 23 482 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000227 0.999110 0.000208 0.000154 0.000147 0.000134

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004021_01183.