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CAZyme Information: MGYG000004021_01434

You are here: Home > Sequence: MGYG000004021_01434

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11471 sp900542765
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; UBA11471 sp900542765
CAZyme ID MGYG000004021_01434
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
707 80820.37 7.954
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004021 2404087 MAG United Kingdom Europe
Gene Location Start: 36168;  End: 38291  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004021_01434.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 61 351 1.7e-117 0.9930555555555556
CE8 405 662 9.2e-30 0.8541666666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 1.34e-153 61 352 1 288
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 2.59e-112 61 352 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
COG4677 PemB 2.97e-08 391 672 75 387
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02432 PLN02432 9.13e-07 407 677 26 279
putative pectinesterase
PLN02708 PLN02708 2.27e-06 406 560 255 395
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ61703.1 0.0 1 707 1 707
QUT92735.1 0.0 1 706 1 706
ALK83448.1 0.0 33 707 40 713
QEW34712.1 0.0 33 707 40 713
QJR66036.1 0.0 33 707 40 713

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 7.09e-61 25 363 58 408
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 1.59e-52 25 344 4 314
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 2.14e-51 25 344 4 314
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]
2NSP_A 7.25e-06 405 618 19 251
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A 7.79e-06 382 454 16 93
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000274 0.999136 0.000158 0.000156 0.000136 0.000128

TMHMM  Annotations      download full data without filtering help

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