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CAZyme Information: MGYG000004037_00454

You are here: Home > Sequence: MGYG000004037_00454

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471;
CAZyme ID MGYG000004037_00454
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
960 103059.71 4.3336
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004037 2199612 MAG United Kingdom Europe
Gene Location Start: 22871;  End: 25753  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004037_00454.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 77 261 1.1e-49 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 2.79e-18 698 861 2 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
smart00560 LamGL 2.20e-09 777 856 51 131
LamG-like jellyroll fold domain.
smart00282 LamG 1.98e-08 747 852 19 131
Laminin G domain.
TIGR04183 Por_Secre_tail 6.75e-07 887 959 3 71
Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.
cd00110 LamG 3.54e-06 747 849 41 142
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT73817.1 8.46e-268 16 959 17 972
AGA79623.1 1.60e-173 24 864 35 845
QDH80543.1 8.62e-173 24 864 35 845
ANF52864.1 7.47e-161 24 958 32 997
AZA85404.1 2.98e-160 24 958 31 998

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 6.07e-114 23 444 20 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 4.61e-113 19 444 16 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q2UB83 1.78e-112 23 444 20 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 2.58e-112 13 444 13 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q5B297 7.33e-112 19 444 16 410
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000249 0.999080 0.000181 0.000150 0.000146 0.000140

TMHMM  Annotations      download full data without filtering help

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