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CAZyme Information: MGYG000004037_00579

You are here: Home > Sequence: MGYG000004037_00579

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471;
CAZyme ID MGYG000004037_00579
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
719 MGYG000004037_7|CGC1 77575.1 4.6376
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004037 2199612 MAG United Kingdom Europe
Gene Location Start: 8398;  End: 10557  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 77 267 2.3e-77 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.60e-05 18 225 22 239
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 7.30e-05 69 267 1 186
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGT73184.1 3.86e-158 26 480 56 543
QDM11318.1 3.08e-157 26 480 56 543
QUT78469.1 3.08e-157 26 480 56 543
QDH54163.1 8.68e-157 26 480 56 543
QUT26995.1 8.68e-157 26 480 56 543

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DPF0 1.88e-43 26 473 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 2.57e-43 26 473 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 2.57e-43 26 473 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7 1.66e-42 12 473 11 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 2.02e-41 26 473 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000239 0.999166 0.000160 0.000150 0.000142 0.000133

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004037_00579.