logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004037_00590

You are here: Home > Sequence: MGYG000004037_00590

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471;
CAZyme ID MGYG000004037_00590
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
706 80942.9 8.9566
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004037 2199612 MAG United Kingdom Europe
Gene Location Start: 30191;  End: 32311  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004037_00590.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 60 351 5e-118 0.9965277777777778
CE8 404 662 2.3e-29 0.8576388888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 1.32e-155 60 352 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 6.35e-115 60 351 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PLN02432 PLN02432 1.57e-10 406 691 26 291
putative pectinesterase
COG4677 PemB 2.99e-07 390 670 75 386
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02497 PLN02497 4.95e-05 369 497 16 128
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ61703.1 0.0 1 706 1 707
QUT92735.1 0.0 1 705 1 706
QEW34712.1 0.0 32 706 40 713
QJR66036.1 0.0 37 706 44 713
QJR70737.1 0.0 37 706 44 713

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 1.24e-55 43 361 77 407
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 1.10e-51 45 343 29 314
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 1.47e-50 45 343 29 314
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000388 0.998974 0.000190 0.000158 0.000126 0.000127

TMHMM  Annotations      download full data without filtering help

start end
9 31