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CAZyme Information: MGYG000004037_01036

You are here: Home > Sequence: MGYG000004037_01036

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471;
CAZyme ID MGYG000004037_01036
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
525 MGYG000004037_14|CGC1 57281.85 6.2671
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004037 2199612 MAG United Kingdom Europe
Gene Location Start: 18845;  End: 20422  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004037_01036.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 50 387 8e-75 0.92

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.59e-64 20 383 79 483
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02188 PLN02188 9.70e-20 20 403 33 393
polygalacturonase/glycoside hydrolase family protein
pfam00295 Glyco_hydro_28 4.04e-15 53 402 1 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 2.67e-14 20 392 64 413
polygalacturonase ADPG
PLN03010 PLN03010 4.88e-13 25 325 48 316
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT46230.1 2.12e-110 26 474 24 467
QRQ48165.1 4.22e-110 26 474 24 467
ACU05310.1 6.61e-109 3 468 8 468
AXY78586.1 1.25e-107 25 477 29 476
ANE51485.1 5.55e-104 25 468 23 461

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 5.80e-33 19 315 40 356
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 1.45e-28 24 381 28 407
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 6.46e-25 26 249 24 236
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
2UVE_A 1.66e-18 24 281 157 462
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A 1.49e-12 32 387 19 364
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 5.95e-22 4 421 43 447
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 3.04e-21 12 281 140 455
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
Q02096 1.30e-15 24 413 85 452
Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1
P18192 7.12e-14 32 387 45 390
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
P35338 9.87e-13 23 405 40 401
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000253 0.999012 0.000193 0.000183 0.000173 0.000157

TMHMM  Annotations      download full data without filtering help

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