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CAZyme Information: MGYG000004037_01374

You are here: Home > Sequence: MGYG000004037_01374

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471;
CAZyme ID MGYG000004037_01374
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
699 MGYG000004037_23|CGC1 76544.69 4.4828
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004037 2199612 MAG United Kingdom Europe
Gene Location Start: 13803;  End: 15902  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004037_01374.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 75 261 1.3e-77 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 6.60e-08 5 381 9 341
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 6.12e-04 69 261 3 186
Amb_all domain.
pfam18884 TSP3_bac 7.79e-04 439 460 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75603.1 6.91e-204 16 494 8 497
QUT77823.1 1.14e-198 22 487 50 520
QUT93111.1 7.39e-196 17 482 37 511
ALJ61309.1 3.42e-195 17 482 41 515
QQR08040.1 9.27e-195 3 645 8 650

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.50e-53 23 482 20 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 2.76e-52 23 482 20 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 7.63e-52 23 484 20 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7 2.91e-47 8 482 7 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B0XMA2 3.81e-46 13 482 13 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000238 0.999114 0.000160 0.000160 0.000157 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004037_01374.