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CAZyme Information: MGYG000004037_01795
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; | |||||||||||
| CAZyme ID | MGYG000004037_01795 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase B | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 880; End: 1977 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 35 | 361 | 1.9e-102 | 0.966996699669967 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 4.26e-101 | 39 | 361 | 11 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 1.67e-97 | 70 | 359 | 1 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 3.93e-81 | 9 | 363 | 5 | 341 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIK55459.1 | 4.39e-114 | 19 | 361 | 559 | 900 |
| QIK60885.1 | 8.66e-114 | 19 | 361 | 559 | 900 |
| ACY69980.1 | 1.74e-95 | 27 | 361 | 8 | 337 |
| QJB32002.1 | 1.70e-94 | 24 | 360 | 30 | 364 |
| QJB38480.1 | 2.40e-94 | 24 | 360 | 30 | 364 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3EMC_A | 1.60e-87 | 25 | 360 | 2 | 328 | Crystalstructure of XynB, an intracellular xylanase from Paenibacillus barcinonensis [Paenibacillus barcinonensis],3EMQ_A Crystal structure of xilanase XynB from Paenibacillus barcelonensis complexed with an inhibitor [Paenibacillus barcinonensis],3EMZ_A Crystal structure of xylanase XynB from Paenibacillus barcinonensis complexed with a conduramine derivative [Paenibacillus barcinonensis] |
| 5Y3X_A | 3.59e-87 | 27 | 361 | 29 | 356 | Crystalstructure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_B Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_C Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_D Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_E Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_F Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL] |
| 4L4O_A | 5.60e-86 | 29 | 363 | 12 | 338 | Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725] |
| 4PMD_A | 3.61e-85 | 29 | 363 | 12 | 338 | Crystalstructure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose [Caldicellulosiruptor bescii DSM 6725] |
| 4L4P_A | 4.48e-85 | 29 | 363 | 12 | 338 | themutant(E139A) structure in complex with xylotriose [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O69231 | 9.04e-87 | 25 | 360 | 3 | 329 | Endo-1,4-beta-xylanase B OS=Paenibacillus barcinonensis OX=198119 GN=xynB PE=1 SV=1 |
| P23556 | 1.26e-83 | 29 | 360 | 16 | 340 | Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=xynA PE=1 SV=1 |
| P45703 | 4.44e-81 | 27 | 361 | 5 | 329 | Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=1 SV=1 |
| Q12603 | 1.10e-78 | 24 | 360 | 29 | 350 | Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1 |
| P40942 | 4.17e-72 | 27 | 361 | 44 | 381 | Thermostable celloxylanase OS=Thermoclostridium stercorarium OX=1510 GN=xynB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000711 | 0.475325 | 0.523267 | 0.000205 | 0.000253 | 0.000220 |