logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004043_00312

You are here: Home > Sequence: MGYG000004043_00312

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; UBA7173;
CAZyme ID MGYG000004043_00312
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
694 MGYG000004043_3|CGC3 74967.13 4.8183
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004043 2180000 MAG United Kingdom Europe
Gene Location Start: 110006;  End: 112090  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004043_00312.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 84 271 4.9e-71 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.14e-04 33 386 29 340
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 8.31e-04 82 229 1 151
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR08040.1 2.07e-200 28 694 24 699
QCD39200.1 8.07e-176 15 694 9 782
QCP72891.1 8.07e-176 15 694 9 782
QUT77823.1 6.54e-170 32 498 51 522
QUT75603.1 3.65e-168 27 612 10 593

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 7.08e-53 32 491 20 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 1.30e-51 32 491 20 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 2.36e-49 32 493 20 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7 1.87e-46 28 491 16 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 1.91e-46 16 491 5 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000513 0.998612 0.000308 0.000202 0.000178 0.000161

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004043_00312.