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CAZyme Information: MGYG000004043_00750

You are here: Home > Sequence: MGYG000004043_00750

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; UBA7173;
CAZyme ID MGYG000004043_00750
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
502 MGYG000004043_8|CGC3 55060.54 5.8212
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004043 2180000 MAG United Kingdom Europe
Gene Location Start: 68821;  End: 70329  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004043_00750.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 82 466 1.1e-78 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 9.98e-83 49 497 75 509
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.28e-19 235 431 85 276
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 5.45e-15 57 408 24 303
Probable polygalacturonase At3g15720
PLN02793 PLN02793 5.83e-14 39 407 36 340
Probable polygalacturonase
PLN02218 PLN02218 2.02e-13 57 402 68 351
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD41743.1 8.95e-277 14 499 11 495
QCP71949.1 8.73e-273 31 499 29 496
QCD38261.1 8.73e-273 31 499 29 496
QIM10174.1 9.93e-179 41 500 32 490
QIK53315.1 4.82e-172 23 499 17 506

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 3.91e-75 30 460 4 408
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 5.49e-60 41 457 29 420
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 8.54e-37 33 488 132 571
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A 2.35e-15 97 459 51 363
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
6KVH_A 6.00e-06 248 422 121 292
ChainA, endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 7.68e-45 55 459 61 421
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 3.73e-37 42 438 141 525
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P27644 1.02e-33 238 459 25 258
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q02096 8.54e-19 46 443 73 403
Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1
P18192 4.71e-16 97 459 77 389
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000360 0.998854 0.000224 0.000220 0.000177 0.000150

TMHMM  Annotations      download full data without filtering help

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