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CAZyme Information: MGYG000004043_01539

You are here: Home > Sequence: MGYG000004043_01539

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; UBA7173;
CAZyme ID MGYG000004043_01539
CAZy Family PL29
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
534 MGYG000004043_30|CGC1 57623.42 5.459
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004043 2180000 MAG United Kingdom Europe
Gene Location Start: 6851;  End: 8455  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004043_01539.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL29 91 397 3.7e-81 0.9966777408637874

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16315 DUF4955 8.19e-54 400 533 1 140
Domain of unknown function (DUF4955). This family consists of uncharacterized proteins around 850 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam12708 Pectate_lyase_3 1.78e-08 92 175 2 79
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
COG5434 Pgu1 5.59e-04 68 178 50 182
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADE56073.1 6.21e-110 57 532 30 511
QDM10828.1 3.46e-105 55 533 320 823
QUT78855.1 3.46e-105 55 533 320 823
QNL40303.1 4.85e-105 55 533 320 823
QZT38145.1 9.16e-105 58 534 28 509

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5ZRU_A 2.83e-08 93 203 188 294
ChainA, Alpha-1,3-glucanase [Niallia circulans],5ZRU_C Chain C, Alpha-1,3-glucanase [Niallia circulans]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000816 0.127222 0.871380 0.000191 0.000227 0.000134

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004043_01539.