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CAZyme Information: MGYG000004050_01006

You are here: Home > Sequence: MGYG000004050_01006

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9;
CAZyme ID MGYG000004050_01006
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
483 MGYG000004050_27|CGC1 55927.93 5.1497
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004050 2129816 MAG United Kingdom Europe
Gene Location Start: 1998;  End: 3449  Strand: -

Full Sequence      Download help

MLKKLILLPM  LCCSMLAVSA  QETLPWENGK  LMVSDEGRYL  RHENGKPFFW  LGDTGWLMPE60
RLNRDEVEYY  LQTCRNAGYN  VVQVQTVNGV  PAMNVYGQYS  MTDGFNFEDI  DRPGVYGYWD120
HMDYIIKTAE  KNGIYIGMVC  IWGGLVRSGL  MDESQARQYG  EFLAGRYKDS  PNIVWIIGGD180
TRGNVNREVW  ETLARTIRSI  DKNHLMTFHP  FGRTASATWF  NDAEWLDFNM  FQSGHRRYGQ240
QEDDGDYTLP  RHHEEENWRY  VEYCQSMKPM  KPVIDGEPVY  EGIPQGLHDP  EEPRWTAADV300
RRYAYWSVFA  GAFGHTYGNN  SIMQFYRPGI  VPAYGATESW  WDALKDPGYN  QMKYLKELIL360
RFPFFERIPD  QSVIAGENGE  RYDYAVATRG  KDYLLVYNHT  GRPMNIDLTK  ISGSRKNVWW420
YNPKYGEYSY  VGEFENKVTF  FFDDLAYGRG  EDRVLVAVDS  SKDYIAVGRK  GIVSESVSVQ480
VPD483

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Created with Snap2448729612014416919321724126528931333836238641043445829455GH140
Family Start End Evalue family coverage
GH140 29 455 1.8e-167 0.9975728155339806

CDD Domains      download full data without filtering help

Created with Snap2448729612014416919321724126528931333836238641043445837362DUF4038368457Collagen_bind_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 5.81e-156 37 362 2 320
Protein of unknown function (DUF4038). A family of putative cellulases.
pfam12904 Collagen_bind_2 6.34e-42 368 457 1 91
Putative collagen-binding domain of a collagenase. This domain is likely to be the collagen-binding domain of a family of bacterial collagenase enzymes. It is the C-terminal part of the Structure 3kzs (information derived from TOPSAN).

CAZyme Hits      help

Created with Snap2448729612014416919321724126528931333836238641043445813465ADY37166.1|GH14022465QUT77834.1|GH14010465ABR40296.1|GH14010465QQY40475.1|GH14010465QEW37289.1|GH140
Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37166.1 1.15e-255 13 465 15 467
QUT77834.1 1.52e-255 22 465 30 476
ABR40296.1 1.02e-254 10 465 13 473
QQY40475.1 1.02e-254 10 465 13 473
QEW37289.1 1.02e-254 10 465 13 473

PDB Hits      download full data without filtering help

Created with Snap24487296120144169193217241265289313338362386410434458244655MSY_A204654QFU_A244653KZS_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MSY_A 2.12e-251 24 465 11 452
Glycosidehydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_B Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_C Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482]
4QFU_A 1.85e-243 20 465 20 468
ChainA, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_B Chain B, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_C Chain C, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_D Chain D, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_E Chain E, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_F Chain F, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_G Chain G, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_H Chain H, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_I Chain I, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_J Chain J, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_K Chain K, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_L Chain L, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482]
3KZS_A 1.56e-239 24 465 11 452
Crystalstructure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_B Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_C Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_D Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001100 0.960228 0.037683 0.000364 0.000315 0.000283

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004050_01006.