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CAZyme Information: MGYG000004055_01180

You are here: Home > Sequence: MGYG000004055_01180

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_G sp900548465
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_G; Eubacterium_G sp900548465
CAZyme ID MGYG000004055_01180
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
526 MGYG000004055_6|CGC2 57891.22 5.2629
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004055 2465387 MAG United Kingdom Europe
Gene Location Start: 55461;  End: 57041  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004055_01180.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 234 513 2.7e-35 0.7907692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02793 PLN02793 3.40e-06 229 361 145 266
Probable polygalacturonase
pfam00295 Glyco_hydro_28 1.53e-05 267 513 81 316
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 2.49e-04 196 360 150 336
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX43664.1 5.56e-213 15 525 11 518
BCK00431.1 1.90e-194 10 525 5 520
ACK41503.1 1.07e-131 40 524 21 483
ACI19833.1 5.96e-131 46 511 27 470
QTE67472.1 7.92e-125 52 506 33 468

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.978961 0.018474 0.000400 0.000180 0.000082 0.001923

TMHMM  Annotations      download full data without filtering help

start end
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