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CAZyme Information: MGYG000004056_00311

You are here: Home > Sequence: MGYG000004056_00311

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes_A ihumii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A ihumii
CAZyme ID MGYG000004056_00311
CAZy Family GH127
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
629 MGYG000004056_11|CGC1 70358.71 5.1853
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004056 2329828 MAG United Kingdom Europe
Gene Location Start: 18760;  End: 20649  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004056_00311.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH127 71 533 5.7e-59 0.9122137404580153

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 3.06e-65 84 534 61 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 8.17e-62 43 534 21 501
Uncharacterized conserved protein, DUF1680 family [Function unknown].
PTZ00470 PTZ00470 4.56e-07 146 328 163 351
glycoside hydrolase family 47 protein; Provisional
COG4225 YesR 4.72e-05 135 284 34 158
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
cd04791 LanC_SerThrkinase 3.46e-04 88 215 93 228
Lanthionine synthetase C-like domain associated with serine/threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARE60508.1 2.37e-205 41 622 29 613
QHS51661.1 7.90e-48 85 536 123 582
AZO44522.1 6.83e-42 20 532 2 560
AXC10260.1 1.39e-41 25 535 83 592
AIQ52276.1 4.98e-40 66 556 59 604

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6EX6_A 1.85e-35 89 539 78 553
TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
4QJY_A 1.22e-32 85 532 81 558
Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A 2.32e-30 85 532 81 558
Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
5MQO_A 4.42e-24 79 513 90 579
Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
3WRE_A 1.80e-19 85 552 80 596
Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH8 9.85e-19 85 552 80 596
Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000341 0.998869 0.000280 0.000172 0.000161 0.000156

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004056_00311.