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CAZyme Information: MGYG000004067_00175

You are here: Home > Sequence: MGYG000004067_00175

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ;
CAZyme ID MGYG000004067_00175
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
787 MGYG000004067_4|CGC1 86278.17 4.6977
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004067 1958521 MAG United Kingdom Europe
Gene Location Start: 28129;  End: 30492  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004067_00175.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 84 275 9.1e-73 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17957 Big_7 9.57e-12 468 532 1 67
Bacterial Ig domain. This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes.
COG3866 PelB 7.46e-08 28 230 29 236
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.60e-05 82 271 1 179
Amb_all domain.
pfam00544 Pec_lyase_C 2.17e-04 121 252 56 198
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
pfam07081 DUF1349 3.03e-04 721 760 108 147
Protein of unknown function (DUF1349). This family consists of several hypothetical bacterial proteins but contains one sequence from Saccharomyces cerevisiae. Members of this family are typically around 200 residues in length. The function of this family is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFH63199.1 3.17e-229 23 784 37 760
AFC30874.1 3.17e-229 23 784 37 760
AEI43214.1 6.36e-229 27 784 41 760
QYR21100.1 4.32e-228 26 784 45 832
AWV33235.1 5.26e-227 22 786 48 841

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3PDD_A 3.37e-06 466 536 92 163
ChainA, Glycoside hydrolase, family 9 [Acetivibrio thermocellus ATCC 27405]
3PE9_A 3.58e-06 468 536 2 71
ChainA, Fibronectin(III)-like module [Acetivibrio thermocellus],3PE9_B Chain B, Fibronectin(III)-like module [Acetivibrio thermocellus],3PE9_C Chain C, Fibronectin(III)-like module [Acetivibrio thermocellus],3PE9_D Chain D, Fibronectin(III)-like module [Acetivibrio thermocellus]
3PDG_A 9.13e-06 468 534 2 69
ChainA, Fibronectin(III)-like module [Acetivibrio thermocellus ATCC 27405]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 1.26e-60 14 461 6 415
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7 1.65e-60 11 461 4 418
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 3.14e-59 23 461 17 419
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 5.99e-59 23 461 17 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 8.28e-59 23 461 17 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000285 0.999066 0.000174 0.000167 0.000149 0.000132

TMHMM  Annotations      download full data without filtering help

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