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CAZyme Information: MGYG000004067_01186

You are here: Home > Sequence: MGYG000004067_01186

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ;
CAZyme ID MGYG000004067_01186
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1121 MGYG000004067_58|CGC1 121479.09 4.3056
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004067 1958521 MAG United Kingdom Europe
Gene Location Start: 8490;  End: 11855  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004067_01186.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 347 539 3.1e-52 0.9562841530054644

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 7.08e-05 272 518 37 259
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 0.001 349 413 12 78
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCS80168.1 2.46e-108 266 1047 28 745
SDT35141.1 1.13e-106 266 1043 50 757
ADQ45070.1 4.77e-106 266 1047 28 745
ADQ05621.1 4.81e-106 266 1121 29 802
QOT12511.1 4.27e-98 263 1045 36 728

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.30e-48 271 715 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 1.10e-47 271 722 22 418
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q2UB83 2.19e-46 271 715 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 1.83e-45 271 715 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 4.37e-43 271 715 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000260 0.999030 0.000197 0.000192 0.000156 0.000135

TMHMM  Annotations      download full data without filtering help

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