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CAZyme Information: MGYG000004075_00042

You are here: Home > Sequence: MGYG000004075_00042

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS1591;
CAZyme ID MGYG000004075_00042
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
558 MGYG000004075_1|CGC1 59858.99 5.1586
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004075 2841804 MAG United Kingdom Europe
Gene Location Start: 39815;  End: 41491  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004075_00042.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 272 537 1.6e-45 0.7569230769230769

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 4.33e-14 238 466 110 395
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 2.01e-07 276 465 106 292
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 3.56e-07 249 463 12 238
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 2.70e-06 274 393 130 241
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX43664.1 3.38e-107 128 556 82 516
BCK00431.1 1.11e-105 128 549 84 510
QTE67472.1 1.30e-104 113 555 35 484
ACI19833.1 1.26e-100 113 558 35 484
ACK41503.1 3.76e-99 113 558 35 484

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DAX2 5.63e-07 281 465 140 341
Probable exopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000037 0.000008 0.000000 0.000000 0.000000 0.000001

TMHMM  Annotations      download full data without filtering help

start end
21 40