You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004081_00317
You are here: Home > Sequence: MGYG000004081_00317
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UCG-010 sp003150215 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-382; UCG-010; UCG-010 sp003150215 | |||||||||||
| CAZyme ID | MGYG000004081_00317 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 78848; End: 83818 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 1.17e-73 | 935 | 1462 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| pfam04851 | ResIII | 8.32e-10 | 1405 | 1494 | 1 | 100 | Type III restriction enzyme, res subunit. |
| smart00487 | DEXDc | 1.39e-09 | 1406 | 1509 | 7 | 110 | DEAD-like helicases superfamily. |
| COG0827 | YtxK | 1.81e-09 | 717 | 922 | 144 | 348 | Adenine-specific DNA methylase [Replication, recombination and repair]. |
| cd18011 | DEXDc_RapA | 2.44e-08 | 1408 | 1470 | 1 | 65 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 2.07e-222 | 639 | 1652 | 1548 | 2578 |
| QIW86704.1 | 3.15e-221 | 639 | 1652 | 1616 | 2646 |
| QIW86628.1 | 3.15e-221 | 639 | 1652 | 1616 | 2646 |
| AXF51455.1 | 6.40e-212 | 632 | 1652 | 1773 | 2811 |
| AEY69616.1 | 4.27e-210 | 632 | 1652 | 1680 | 2718 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 1.03e-26 | 637 | 1653 | 27 | 1114 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
| P52284 | 1.99e-07 | 730 | 823 | 26 | 115 | Type II methyltransferase M.CvrRI OS=Paramecium bursaria Chlorella virus XZ-6E OX=36360 GN=CVIRIM PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000072 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |