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CAZyme Information: MGYG000004085_01270
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UMGS1253; UMGS1253; | |||||||||||
| CAZyme ID | MGYG000004085_01270 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Anti-sigma-I factor RsgI6 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 99297; End: 100628 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 53 | 382 | 1.5e-45 | 0.9735973597359736 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00633 | Glyco_10 | 3.44e-36 | 97 | 381 | 3 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 5.45e-26 | 97 | 381 | 69 | 337 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam00331 | Glyco_hydro_10 | 1.02e-22 | 77 | 381 | 24 | 308 | Glycosyl hydrolase family 10. |
| pfam13620 | CarboxypepD_reg | 0.007 | 36 | 52 | 5 | 21 | Carboxypeptidase regulatory-like domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVM44415.1 | 7.98e-116 | 20 | 440 | 24 | 439 |
| QHV94149.1 | 1.05e-111 | 17 | 441 | 31 | 445 |
| QIP12711.1 | 2.11e-111 | 17 | 441 | 31 | 445 |
| AEI51978.1 | 2.81e-105 | 17 | 440 | 31 | 440 |
| AXE20297.1 | 1.26e-103 | 17 | 440 | 31 | 440 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7D88_A | 7.27e-28 | 23 | 429 | 50 | 411 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 7D89_A | 6.38e-27 | 23 | 429 | 50 | 411 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 4L4O_A | 3.12e-16 | 79 | 345 | 16 | 301 | Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725] |
| 4PMD_A | 1.74e-15 | 79 | 345 | 16 | 301 | Crystalstructure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose [Caldicellulosiruptor bescii DSM 6725] |
| 4L4P_A | 1.85e-15 | 79 | 345 | 16 | 301 | themutant(E139A) structure in complex with xylotriose [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DH97 | 1.00e-28 | 19 | 432 | 382 | 749 | Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1 |
| Q60041 | 9.53e-16 | 59 | 387 | 38 | 341 | Endo-1,4-beta-xylanase B OS=Thermotoga neapolitana OX=2337 GN=xynB PE=3 SV=1 |
| Q12603 | 4.69e-14 | 64 | 347 | 19 | 318 | Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1 |
| P40944 | 2.00e-11 | 79 | 358 | 359 | 660 | Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor sp. (strain Rt8B.4) OX=28238 GN=xynA PE=3 SV=1 |
| O69230 | 5.31e-10 | 123 | 345 | 431 | 674 | Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000049 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |