CAZyme Information: MGYG000004094_01119

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae
• CAZyme ID: MGYG000004094_01119
• CAZy Family: PL29
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
545	MGYG000004094_6|CGC1	60604.01	5.7869

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004094	3605841	MAG	United Kingdom	Europe

• Gene Location: Start: 7311; End: 8948 Strand: +

Full Sequence      

MLKHKFKVIFIFCTCLSIMPSCSKEQNTTIVPPTEDNNGNQEEKPEPPIQAGTSKLWTEF
LECKKDGTESTLLDFSYAGYEFGEKNIPDVDYKIYNVCSPEYGAIPNDNKSDREAFEKAI
ADAVKNGKGIIYFPKGRYNLRPADAPNQPIIIDGDNIILKGDGCGNGGTELFMEYPNEVL
DNSLWNTPELISFRYTRSTDKQLTEITGDAIRGSHSITVNSTSGLFIGKRVFLKLVNNNP
ELIAEELSPYSVESDWTELLNSGVQVTEYHQILRIEGNKVTFKEPIMHKVNAKWGWTLHE
HSCHIGVGVEDIAFVGNFHDTFVHHANALHDSGFRPLTLMRQVNAWVRRCRFTDVNEALS
VMLSANVSIFSCSITGNRGHSAIRSQASSHIFIGKIDDQPAQYHSVGVSKTSIGAVLWRN
KTASNSCFEAHSSQPRATLIDACEGGFMQNHAGGDIASSPNHLSDLVLWNYKETDGAETG
FNLWTRNNRYLKPIIAGFHGAGTTFLPDQVTADESHGTAVYPESLYEAQLTERLGALPDW
LQQLK

Enzyme Prediction     

No EC number prediction in MGYG000004094_01119.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL29	95	398	3.9e-101	0.9933554817275747

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16315	DUF4955	2.97e-75	402	544	2	149	Domain of unknown function (DUF4955). This family consists of uncharacterized proteins around 850 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam12708	Pectate_lyase_3	1.39e-04	101	163	6	62	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam13229	Beta_helix	0.010	327	393	39	105	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QZT38145.1	5.62e-169	49	545	20	518
QZE12858.1	2.72e-164	51	545	22	518
QNL40303.1	9.01e-139	51	545	317	833
QIU93728.1	1.05e-138	49	545	301	852
QDM10828.1	1.27e-138	51	545	317	833

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000004	0.001403	0.998635	0.000001	0.000001	0.000001

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004094_01119.