dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004094_01140

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Species

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; ;

CAZyme ID

MGYG000004094_01140

CAZy Family

CE12

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
573	MGYG000004094_6\|CGC2	64386.65	7.3075

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004094	3605841	MAG	United Kingdom	Europe

Gene Location

Start: 37714; End: 39435 Strand: -

No EC number prediction in MGYG000004094_01140.

Family	Start	End	Evalue	family coverage
CE8	272	545	3.6e-100	0.9479166666666666
CE12	25	256	6.3e-78	0.9952380952380953

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd01821	Rhamnogalacturan_acetylesterase_like	1.20e-84	24	256	1	198	Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN02773	PLN02773	1.61e-83	274	544	9	284	pectinesterase
pfam01095	Pectinesterase	5.48e-72	271	539	1	275	Pectinesterase.
PLN02682	PLN02682	1.11e-71	270	544	69	349	pectinesterase family protein
COG4677	PemB	1.00e-65	245	556	56	404	Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QEW38148.1	4.10e-315	1	566	1	566
AII65135.1	1.67e-314	1	566	1	566
AII67884.1	3.36e-314	1	566	1	566
QJR56762.1	3.36e-314	1	566	1	566
QJR66992.1	3.36e-314	1	566	1	566

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1GQ8_A	2.93e-43	273	535	10	278	Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A	5.21e-42	273	556	6	300	ChainA, Pectinesterase 1 [Solanum lycopersicum]
2NSP_A	5.68e-34	270	563	4	340	ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A	2.76e-32	270	543	31	350	Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
1QJV_A	1.73e-29	270	563	4	340	ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q9LVQ0	3.14e-59	274	544	9	284	Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q9FM79	2.08e-49	273	560	83	377	Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q8VYZ3	8.30e-49	276	544	90	363	Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
P41510	4.29e-48	272	554	273	567	Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus OX=3708 GN=BP19 PE=2 SV=1
Q42608	1.26e-47	272	554	260	554	Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris OX=3711 PE=2 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.004378	0.298143	0.697013	0.000142	0.000158	0.000156

There is no transmembrane helices in MGYG000004094_01140.