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CAZyme Information: MGYG000004094_01146

You are here: Home > Sequence: MGYG000004094_01146

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; ;
CAZyme ID MGYG000004094_01146
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
413 MGYG000004094_6|CGC2 48147.88 8.7535
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004094 3605841 MAG United Kingdom Europe
Gene Location Start: 48925;  End: 50166  Strand: -

Full Sequence      Download help

MKSKKMKKNF  RNLLLAGALL  FSIQIQSQQT  VSTDLPWSVR  MVESEMIRCP  ESWQLDFQPA60
LKWDYCHGLE  LQAVLDVYDT  YGNDKYFNYA  LAYADTMTNA  DGTIVTYRPT  ELSLDRINSG120
KFYFRIYEQT  KEEKYKKALD  LLRNQFDNQP  RTKEGGFWHK  KIYPHQMWLD  GIYMASPFYA180
EYAYRNNRPQ  DYQDVIRQFL  VIAKHTYDPA  NDVYRHAWDE  SSSMPWADKV  TGQAPHSWGR240
AMGWYAMALV  DVLDFIPKHE  EKRDSVLMIL  DRVAGQIKRL  QDHKTGLWYQ  VLDRSGDKGN300
YLESSVSTMF  VYSLFKAVRK  GYLDKRYLEV  AEKGYRGIIN  DFIEVDKNGL  VSITQVCAVA360
GLGGNPYRSG  DYDYYINEKI  RSNDAKAVGP  FIMASLEWER  LCPQARKSLK  VIR413

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Created with Snap2041618210312314416518520622724726828930933035137139257400GH105
Family Start End Evalue family coverage
GH105 57 400 4.8e-122 0.9789156626506024

CDD Domains      download full data without filtering help

Created with Snap2041618210312314416518520622724726828930933035137139237401Glyco_hydro_8857401YesR
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 8.29e-128 37 401 1 342
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 3.82e-107 57 401 28 356
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap2041618210312314416518520622724726828930933035137139217401QUT77882.1|GH10517401QDO69177.1|GH10517401QUT93209.1|GH10517401ALJ61262.1|GH1056401QRQ48639.1|GH105
Hit ID E-Value Query Start Query End Hit Start Hit End
QUT77882.1 3.29e-220 17 401 13 396
QDO69177.1 4.25e-220 17 401 13 396
QUT93209.1 2.45e-219 17 401 13 396
ALJ61262.1 2.45e-219 17 401 13 396
QRQ48639.1 1.98e-216 6 401 1 397

PDB Hits      download full data without filtering help

Created with Snap20416182103123144165185206227247268289309330351371392634014WU0_A564071NC5_A564072GH4_A463393QWT_A1414013K11_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WU0_A 5.29e-114 63 401 23 361
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A 1.56e-88 56 407 32 373
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 6.46e-88 56 407 22 363
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3QWT_A 3.77e-21 46 339 48 329
ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3K11_A 2.12e-20 141 401 169 413
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2041618210312314416518520622724726828930933035137139256407sp|O34559|URHG2_BACSU174397sp|P0A3U6|PIC1_AGRFC174397sp|P0A3U7|PIC1_RHIRD57352sp|O31521|URHG1_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 8.53e-88 56 407 32 373
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 6.31e-45 174 397 1 227
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 6.31e-45 174 397 1 227
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1
O31521 2.92e-19 57 352 23 297
Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000884 0.998214 0.000356 0.000199 0.000173 0.000159

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004094_01146.