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CAZyme Information: MGYG000004094_01569

You are here: Home > Sequence: MGYG000004094_01569

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; ;
CAZyme ID MGYG000004094_01569
CAZy Family GH55
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1007 MGYG000004094_10|CGC2 112778.93 7.0803
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004094 3605841 MAG United Kingdom Europe
Gene Location Start: 45975;  End: 48998  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004094_01569.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH55 40 618 1.3e-87 0.7864864864864864

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12708 Pectate_lyase_3 2.23e-14 48 249 7 195
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708 Pectate_lyase_3 2.83e-13 381 609 1 210
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam08450 SGL 9.64e-12 906 993 145 242
SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.
COG3386 YvrE 3.36e-11 704 1002 2 282
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism].
COG5434 Pgu1 6.92e-07 382 518 83 248
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QPH57852.1 0.0 29 1000 26 999
BBK89258.1 0.0 29 1000 26 999
QUU00135.1 0.0 29 1000 27 1000
QQA31095.1 0.0 29 1000 26 999
QUT62545.1 0.0 29 1000 26 999

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3EQN_A 1.73e-11 47 462 54 480
ChainA, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]
3GQ7_A 5.59e-08 382 447 23 88
ChainA, Preneck appendage protein [Salasvirus phi29],3GQ8_A Chain A, Preneck appendage protein [Salasvirus phi29],3GQ9_A Chain A, Preneck appendage protein [Salasvirus phi29],3GQA_A Chain A, Preneck appendage protein [Salasvirus phi29]
3SUC_A 6.31e-08 382 447 23 88
ChainA, Preneck appendage protein [Bacillus phage phi29]
6QZ9_A 6.57e-08 382 447 105 170
ChainA, Pre-neck appendage protein [Salasvirus phi29],6QZ9_B Chain B, Pre-neck appendage protein [Salasvirus phi29],6QZ9_C Chain C, Pre-neck appendage protein [Salasvirus phi29],6QZ9_D Chain D, Pre-neck appendage protein [Salasvirus phi29],6QZ9_E Chain E, Pre-neck appendage protein [Salasvirus phi29],6QZ9_F Chain F, Pre-neck appendage protein [Salasvirus phi29],6QZ9_G Chain G, Pre-neck appendage protein [Salasvirus phi29],6QZ9_H Chain H, Pre-neck appendage protein [Salasvirus phi29],6QZ9_I Chain I, Pre-neck appendage protein [Salasvirus phi29],6QZ9_J Chain J, Pre-neck appendage protein [Salasvirus phi29],6QZ9_K Chain K, Pre-neck appendage protein [Salasvirus phi29],6QZ9_L Chain L, Pre-neck appendage protein [Salasvirus phi29],6QZ9_M Chain M, Pre-neck appendage protein [Salasvirus phi29],6QZ9_N Chain N, Pre-neck appendage protein [Salasvirus phi29],6QZ9_O Chain O, Pre-neck appendage protein [Salasvirus phi29],6QZ9_P Chain P, Pre-neck appendage protein [Salasvirus phi29],6QZ9_Q Chain Q, Pre-neck appendage protein [Salasvirus phi29],6QZ9_R Chain R, Pre-neck appendage protein [Salasvirus phi29],6QZ9_S Chain S, Pre-neck appendage protein [Salasvirus phi29],6QZ9_T Chain T, Pre-neck appendage protein [Salasvirus phi29],6QZ9_U Chain U, Pre-neck appendage protein [Salasvirus phi29],6QZ9_V Chain V, Pre-neck appendage protein [Salasvirus phi29],6QZ9_W Chain W, Pre-neck appendage protein [Salasvirus phi29],6QZ9_X Chain X, Pre-neck appendage protein [Salasvirus phi29],6QZ9_Y Chain Y, Pre-neck appendage protein [Salasvirus phi29],6QZ9_Z Chain Z, Pre-neck appendage protein [Salasvirus phi29],6QZ9_a Chain a, Pre-neck appendage protein [Salasvirus phi29],6QZ9_b Chain b, Pre-neck appendage protein [Salasvirus phi29],6QZ9_c Chain c, Pre-neck appendage protein [Salasvirus phi29],6QZ9_d Chain d, Pre-neck appendage protein [Salasvirus phi29],6QZ9_e Chain e, Pre-neck appendage protein [Salasvirus phi29],6QZ9_f Chain f, Pre-neck appendage protein [Salasvirus phi29],6QZ9_g Chain g, Pre-neck appendage protein [Salasvirus phi29],6QZ9_h Chain h, Pre-neck appendage protein [Salasvirus phi29],6QZ9_i Chain i, Pre-neck appendage protein [Salasvirus phi29],6QZ9_j Chain j, Pre-neck appendage protein [Salasvirus phi29],6QZF_A Chain A, Pre-neck appendage protein [Salasvirus phi29],6QZF_B Chain B, Pre-neck appendage protein [Salasvirus phi29],6QZF_C Chain C, Pre-neck appendage protein [Salasvirus phi29],6QZF_D Chain D, Pre-neck appendage protein [Salasvirus phi29],6QZF_E Chain E, Pre-neck appendage protein [Salasvirus phi29],6QZF_F Chain F, Pre-neck appendage protein [Salasvirus phi29],6QZF_G Chain G, Pre-neck appendage protein [Salasvirus phi29],6QZF_H Chain H, Pre-neck appendage protein [Salasvirus phi29],6QZF_I Chain I, Pre-neck appendage protein [Salasvirus phi29],6QZF_J Chain J, Pre-neck appendage protein [Salasvirus phi29],6QZF_K Chain K, Pre-neck appendage protein [Salasvirus phi29],6QZF_L Chain L, Pre-neck appendage protein [Salasvirus phi29],6QZF_M Chain M, Pre-neck appendage protein [Salasvirus phi29],6QZF_N Chain N, Pre-neck appendage protein [Salasvirus phi29],6QZF_O Chain O, Pre-neck appendage protein [Salasvirus phi29],6QZF_P Chain P, Pre-neck appendage protein [Salasvirus phi29],6QZF_Q Chain Q, Pre-neck appendage protein [Salasvirus phi29],6QZF_R Chain R, Pre-neck appendage protein [Salasvirus phi29],6QZF_S Chain S, Pre-neck appendage protein [Salasvirus phi29],6QZF_T Chain T, Pre-neck appendage protein [Salasvirus phi29],6QZF_U Chain U, Pre-neck appendage protein [Salasvirus phi29],6QZF_V Chain V, Pre-neck appendage protein [Salasvirus phi29],6QZF_W Chain W, Pre-neck appendage protein [Salasvirus phi29],6QZF_X Chain X, Pre-neck appendage protein [Salasvirus phi29],6QZF_Y Chain Y, Pre-neck appendage protein [Salasvirus phi29],6QZF_Z Chain Z, Pre-neck appendage protein [Salasvirus phi29],6QZF_a Chain a, Pre-neck appendage protein [Salasvirus phi29],6QZF_b Chain b, Pre-neck appendage protein [Salasvirus phi29],6QZF_c Chain c, Pre-neck appendage protein [Salasvirus phi29],6QZF_d Chain d, Pre-neck appendage protein [Salasvirus phi29],6QZF_e Chain e, Pre-neck appendage protein [Salasvirus phi29],6QZF_f Chain f, Pre-neck appendage protein [Salasvirus phi29],6QZF_g Chain g, Pre-neck appendage protein [Salasvirus phi29],6QZF_h Chain h, Pre-neck appendage protein [Salasvirus phi29],6QZF_i Chain i, Pre-neck appendage protein [Salasvirus phi29],6QZF_j Chain j, Pre-neck appendage protein [Salasvirus phi29]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P07537 2.74e-07 382 447 105 170
Preneck appendage protein OS=Bacillus phage PZA OX=10757 GN=12 PE=3 SV=1
P20345 3.60e-07 382 447 105 170
Pre-neck appendage protein OS=Bacillus phage phi29 OX=10756 GN=12 PE=1 SV=1
Q37893 3.61e-07 382 449 104 171
Pre-neck appendage protein OS=Bacillus phage B103 OX=10778 GN=12 PE=3 SV=1
P49426 9.18e-06 361 607 53 278
Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000784 0.436398 0.562259 0.000193 0.000190 0.000174

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004094_01569.