logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004105_00239

You are here: Home > Sequence: MGYG000004105_00239

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes_A sp900546005
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A sp900546005
CAZyme ID MGYG000004105_00239
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
620 MGYG000004105_1|CGC5 69810.65 5.8208
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004105 2464466 MAG United Kingdom Europe
Gene Location Start: 282232;  End: 284094  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004105_00239.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 55 481 2.2e-80 0.5026595744680851

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 1.52e-65 37 472 14 476
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 4.94e-57 22 475 13 492
beta-galactosidase.
COG3250 LacZ 4.49e-45 64 481 12 441
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 3.05e-23 322 475 1 165
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837 Glyco_hydro_2_N 4.61e-20 64 190 1 145
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA23685.1 4.35e-314 1 618 1 615
BCG54468.1 3.26e-232 6 620 12 627
BBL04653.1 3.12e-91 28 480 22 435
BBL14184.1 4.40e-91 28 480 22 435
CDN30860.1 4.65e-86 1 481 1 514

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 1.95e-54 61 481 41 496
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 2.28e-50 48 481 32 500
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
6S6Z_A 1.33e-47 66 471 40 466
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 1.34e-47 66 471 41 467
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3VD3_A 3.02e-42 58 496 74 541
E.coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_B E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_C E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_D E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD4_A E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_B E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_C E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_D E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 3.29e-52 28 471 22 507
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q6LL68 2.17e-50 29 483 14 494
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
A5F5U6 4.26e-49 65 475 48 489
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
Q56307 7.32e-47 66 471 41 467
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
A1SWB8 3.01e-46 46 476 32 491
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000300 0.998900 0.000302 0.000176 0.000160 0.000152

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004105_00239.