logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004105_00399

You are here: Home > Sequence: MGYG000004105_00399

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes_A sp900546005
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A sp900546005
CAZyme ID MGYG000004105_00399
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
723 81775.12 5.075
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004105 2464466 MAG United Kingdom Europe
Gene Location Start: 67033;  End: 69204  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004105_00399.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 77 442 3.1e-20 0.35194174757281554

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 9.25e-18 169 704 351 870
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.003 481 589 2 84
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA24282.1 0.0 6 723 5 721
QEH34259.1 6.54e-121 27 720 32 736
QTH41446.1 2.63e-73 29 707 58 742
QTH41453.1 1.18e-68 24 719 244 948
QHI69791.1 2.86e-56 7 698 8 682

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 7.29e-12 169 703 410 941
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.057334 0.393268 0.548651 0.000258 0.000214 0.000252

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004105_00399.