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CAZyme Information: MGYG000004108_00412

You are here: Home > Sequence: MGYG000004108_00412

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1387 sp900551295
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-382; UMGS1387; UMGS1387 sp900551295
CAZyme ID MGYG000004108_00412
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
612 67622.44 4.2285
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004108 2373167 MAG United Kingdom Europe
Gene Location Start: 72162;  End: 74000  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004108_00412.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3409 PGRP 7.88e-18 330 510 23 183
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 3.49e-16 440 599 35 181
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam01471 PG_binding_1 1.98e-14 351 413 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
pfam01471 PG_binding_1 4.72e-13 540 601 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
pfam01471 PG_binding_1 1.76e-10 449 510 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRT50293.1 1.23e-103 33 427 27 419
QIX92999.1 8.77e-103 2 426 9 415
ANU48790.1 1.24e-102 2 426 9 415
QQR02302.1 1.24e-102 2 426 9 415
ASN94441.1 1.74e-102 2 426 9 415

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1LBU_A 9.35e-08 346 413 10 73
HydrolaseMetallo (zn) Dd-peptidase [Streptomyces albus G]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P00733 1.89e-07 329 413 34 115
Zinc D-Ala-D-Ala carboxypeptidase OS=Streptomyces albus G OX=1962 PE=1 SV=2
L7N653 2.50e-07 381 511 51 161
N-acetylmuramoyl-L-alanine amidase CwlM OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=cwlM PE=1 SV=1
Q99125 4.88e-07 326 505 177 344
Probable N-acetylmuramoyl-L-alanine amidase OS=Bacillus licheniformis OX=1402 PE=3 SV=1
P49320 7.82e-07 346 415 43 107
Uncharacterized protein in bpoA1 3'region (Fragment) OS=Kitasatospora aureofaciens OX=1894 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999926 0.000108 0.000002 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004108_00412.